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Chip Gerfen
D1-D2
GPe
GENSATcreBrains
Hooks_IT_PT_cases
Layer 5 IT, PL56
Layer 5 PT, KJ18
Layer 6, GN220
registered brains
registered GN220 CT
registered KJ18 PT
registered PL56 IT
Hooks_MHenh
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Collection: GENSATcreBrains
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505_AS05_KG139_cof_stack20.jpx
Arhgef6_NL189_AAV:BL amygdala_1149
Amygdala (BL)
AAVtracer: BL amygdala
Arhgef6_NL189
amygdala
patches
Arhgef6_NL189_AAV:BL amygdala_1149
Amygdala (BL)
AAVtracer: BL amygdala
Arhgef6_NL189
amygdala
patches
bltr_602_jSV094_SL1_H2B_3x_840_0504.jpx
Ccdc3_PO24_AAV:cortex(MOp)_4939
Layer 2/3
IT corticostriatal
AAVtracer: cortex (MOp)
Ccdc3_PO24
Cerebral Cortex
Layer 2/3
a_ctx_MOp_primary motor cortex
corticostriatal
Ccm2_OC103_AAV:amygdala(ce)_0760
AAV tracer: amygdala (ce)
some striatum
Gcm2_OC103
amygdala
striatum
Chrna2_OE25_AAV:cortex(MOp,SSp)_1168
PT corticostriatal
AAVtracer: cortex (MOp,SSp)
Cerebral Cortex
Chrna2_OE25
Layer 5_PT
a_ctx_MOp_primary motor cortex
a_ctx_SSp_primary somatosensory cortex
Chrna2_OE25_AAV:cortex(MOp,SSp)_4454
PT corticostriatal
AAVtracer: cortex (MOp; SSp)
1in5 brain series
Chrna2_OE25
Layer 5_PT
a_ctx_MOp_primary motor cortex
a_ctx_SSp_primary somatosensory cortex
corticostriatal
Chrna2_OE25_AAV:cortex(MOp)_1165
PT corticostriatal
AAVtracer: cortex (MOp)
Cerebral Cortex
Chrna2_OE25
Layer 5_PT
a_ctx_MOp_primary motor cortex
Chrna2_OE25_AAV:cortex(MOs,PL)_0635
PT corticostriatal
AAVtracer: cortex (MOs/ PL)
Chrna2_OE25
Figure_4_PT Supplemental
Layer 5_PT
a_ctx_MOs_secondary motor cortex
a_ctx_prefrontal cortex
corticostriatal
Chrna2_OE25_AAV:cortex(PL)_3108
PT corticostriatal
AAVtracer: prefrontal cortex
1in5 brain series
Chrna2_OE25
Figure_6_prefrontal
Layer 5_PT
a_ctx_prefrontal cortex
corticostriatal
Chrna2_OE25_AAV:cortex(SSp)_1623
PT corticostriatal
AAVtracer: cortex (SSp)
Chrna2_OE25
Layer 5_PT
a_ctx_SSp_primary somatosensory cortex
corticostriatal
Chrna2_OE25_AAV:cortex(SSp)_2393
PT corticostriatal
AAVtracer: cortex (SSp)
Chrna2_OE25
Figure_4_PT Supplemental
Layer 5_PT
Layers (2/3/5a/5b/6)
a_ctx_SSp_primary somatosensory cortex
corticostriatal
Chrna2_OE25_reporter_1855
Cre-reporter
PT corticostriatal
02_Cre_withReporter
Chrna2_OE25
Layer 5_PT
Chrna5_NP306_AAV:striatum_0625
striatum: scattered spiny projection neurons
Chrna5_NP306
striatum
Chrna5_NP306_reporter_4661
Cre-reporter
striatum
scattered spiny projection neurons
02_Cre_withReporter
Chrna5_NP306
striatum
Colgalt2_NF110_reporter_3971
Cre reporter
IT/PT corticostriatal
02_Cre_withReporter
Colgalt2_NF110
Crh_KN282_AAV:thalamus(VPM)_2243
thalamo-cortical
AAVtracer: thalamus(VPM)
1in5 brain series
Crh_KN282
thalamo-cortical
thalamus
Crh_KN282_AAV:thalamus(VPM)_2248
thalamo-cortical
AAVtracer: thalamus (VPM)
1in5 brain series
Crh_KN282
thalamo-cortical
thalamus
Crhr1_KF118_AAV:hippocampus_567
AAVtracer: hippocampus
Crhr1_KF118
a_ctx_hippocampus
Crhr1_KF118_AAV:hippocampus_571
AAVtracer:hippocampus
Crhr1_KF118
a_ctx_hippocampus
Cx3cl1_RA63_1692_AAV:cortex(MOp)
cortex layer 2/3/5, IT and CT
AAVtracer:cortex(MOp)
Cerebral Cortex
Cx3cl1_RA63
Layer 2/3
a_ctx_MOp_primary motor cortex
corticostriatal
corticothalamic
D630045J12Rik_SG2_reporter_1759
Cre reporter
Layer 5, IT corticostriatal
02_Cre_withReporter
D630045J12Rik_SG2
Dlg3_KG118_reporter_4676
Cre-reporter
striatum: patches
02_Cre_withReporter
Dlg3_KG118
patches
striatum
Drd1a_EY217_AAV:striatum_3871
direct striatal pathway
AAVtracer: striatum
TH labeled in yellow
Drd1a_EY217
direct pathway
striatum
Drd1a_EY217_AAV:striatum_3874
direct striatal pathway
AAVtracer: striatum
TH labeled in yellow
Drd1a_EY217
direct pathway
striatum
Drd1a_EY217_AAV:striatum_3877
direct striatal pathway
AAVtracer: striatum
Drd1a_EY217
direct pathway
striatum
Drd1a_FK150_reporter_3430
Cre reporter
Drd1a_red
TH_green
02_Cre_withReporter
Drd1a_FK150
Drd1a_FK150_reporter_3434
Cre reporter
Drd1a_red
TH_green
02_Cre_withReporter
Drd1a_FK150
Ebf2_NP183_AAV:cortex(SSp)_0480
Layer 6b
AAVtracer: SSp and MOp
axons distributed in L2-5
Parvalbumin (PV) immunostain: RED
Ebf2_NP183
Layer 6
Layer 6b
a_ctx_MOp_primary motor cortex
a_ctx_SSp_primary somatosensory cortex
Ebf2_NP183_AAV:cortex(SSp)_4514
IT corticostriatal
AAVtracer:cortex (SSp)
1in5 brain series
Ebf2_NP183
Figure_5_ITcorticostriatal
Layer 5_IT
a_ctx_SSp_primary somatosensory cortex
corticostriatal
Efr3a_NO108_AAV:cortex(MOp)_0259
PT corticostriatal
AAVtracer: cortex (MOp)
Cerebral Cortex
Efr3a_NO108
Layer 5_PT
a_ctx_MOp_primary motor cortex
corticostriatal
Efr3a_NO108_AAV:cortex(SSp)_4717
PT corticostriatal
AAVtracer: cortex (SSp)
1in5 brain series
Efr3a_NO108
Figure_4_PTcorticostriatal
Layer 5_PT
a_ctx_SSp_primary somatosensory cortex
corticostriatal
Epyc_KR363_reporter_1443
Cre reporter
02_Cre_withReporter
Epyc_KR363
Gcm2_OC103_4897
striatum
AAVtracer: striatum
not clear if selective for direct/indirect
Gcm2_OC103
striatum
Glt25d2_NF107_AAV:cortex(PL)_576
PT/IT corticostriatal
AAVtracer: cortex(PL)
1in5 brain series
Figure_6_prefrontal
Glt25d2_NF107
Layer 5_PT and IT
a_ctx_prefrontal cortex
Glt25d2_NF110_AAV:cortex(MOs)_0035
PT/IT corticostriatal
AAVtracer: cortex (MOs)
Glt25d2_NF110
Layer 5_PT and IT
a_ctx_MOs_secondary motor cortex
corticostriatal
GN220_AAV:MOp_3861
Layer 6: corticothalamic
AAVtracer: MOp
Layer 6
Ntsr1_GN220
a_ctx_MOp_primary motor cortex
corticothalamic
GN220_AAV:MOp_SSp_3860
Layer 6: corticothalamic
AAVtracer: MOp_SSp
Layer 6
Ntsr1_GN220
a_ctx_MOp_primary motor cortex
a_ctx_SSp_primary somatosensory cortex
corticothalamic
GN220_AAV:SSp_3863
Layer 6_corticothalamic
AAV: SSp
Layer 6
Ntsr1_GN220
a_ctx_SSp_primary somatosensory cortex
corticothalamic
Gpr26_KO250_AAV:thalamus (VAL,LD)_4890
AAV tracer: thalamus
VAL, LD
Gpr26_KO250
thalamo-cortical
thalamus
Gpr26_KO250_AAV:thalamus(VPM)_4889
thalamo-cortical
AAVtracer: thalamus (VPM)
Gpr26_KO250
thalamo-cortical
thalamus
Grm2_MR89_AAV:cortex(MOs)_2572
PT/IT corticostriatal
AAVtracer: cortex (MOs)
1in5 brain series
Grm2_MR89
Layer 5_PT and IT
a_ctx_MOs_secondary motor cortex
corticostriatal
Grm2_MR90_AAV:cortex(MOp)_1311
PT/IT corticostriatal
AAVtracer: motor cortex (MOp)
Grm2_MR90
Layer 5_PT and IT
a_ctx_MOp_primary motor cortex
corticostriatal
Grm2_MR90_AAV:cortex(MOp)3630
PT/IT corticostriatal
AAVtracer: cortex (MOp)
Grm2_MR90
Layer 5_PT and IT
corticostriatal
Grm2_MR90_AAV:cortex(MOs)_1127
PT/IT corticostriatal
AAVtracer: cortex (MOs/PL)
Grm2_MR90
Layer 5_PT and IT
a_ctx_MOs_secondary motor cortex
a_ctx_prefrontal cortex
corticostriatal
Grm2_MR90_AAV:cortex(MOs)_3626
PT/IT corticostriatal
AAVtracer: cortex (MOs)
Grm2_MR90
Layer 5_PT and IT
a_ctx_MOs_secondary motor cortex
corticostriatal
Grp_KH288_AAV:cortex(AC)_2888
IT corticostriatal
AAVtracer: cortex (anterior cingulate)
Cerebral Cortex
Grp_KH288
Layer 5_IT
a_ctx_prefrontal cortex
corticostriatal
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