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Chip Gerfen
D1-D2
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GENSATcreBrains
Hooks_IT_PT_cases
Layer 5 IT, PL56
Layer 5 PT, KJ18
Layer 6, GN220
registered brains
registered GN220 CT
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Hooks_MHenh
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Sepw1_NP39_AAV:cortex(PL)_1814
Layer 2/3
AAVtracer: cortex (PL)
cortico-cortical and -striatal
Layer 2/3
Layer 5_IT
Sepw1_NP39
a_ctx_prefrontal cortex
corticostriatal
Sepw1_NP67_AAV:striatum_2105
striatum:patches
AAVtracer: striatum
TH:yellow
Sepw1_NP67
patches
striatum
Sepw1_NP67_AAV:striatum_2106
striatal patches
AAVtracer: striatum
TH: yellow
Sim1_KJ18_AAV:cortex(MOp),cortex(SSp)_537a
PT corticostriatal
Two AAVtracers:
RED: cortex (MOp)
EGFP: cortex (SSp)
Layer 5_PT
Sim1_KJ18
a_ctx_MOp_primary motor cortex
a_ctx_SSp_primary somatosensory cortex
corticostriatal
Sim1_KJ18_AAV:cortex(MOp)_4567
PT corticostriatal
AAVtracer: cortex (MOp / SSp)
Layer 5_PT
Sim1_KJ18
a_ctx_MOp_primary motor cortex
a_ctx_SSp_primary somatosensory cortex
corticostriatal
Sim1_KJ18_AAV:cortex(MOp)_4570
PT corticostriatal
AAVtracer: cortex (MOp / SSp)
Layer 5_PT
Layers (2/3/5a/5b/6)
Sim1_KJ18
a_ctx_MOp_primary motor cortex
a_ctx_SSp_primary somatosensory cortex
corticostriatal
Sim1_KJ18_AAV:cortex(MOp)_542
PT corticostriatal
AAVtracer: cortex (MOp)
1in5 brain series
Layer 5_PT
Sim1_KJ18
a_ctx_MOp_primary motor cortex
corticostriatal
Sim1_KJ18_AAV:cortex(SSp)_2902
PT corticostriatal
AAVtracer: cortex (SSp)
Layer 5_PT
Sim1_KJ18
a_ctx_SSp_primary somatosensory cortex
corticostriatal
Sim1_KJ18_AAV:cortex(SSp)_2903
PT corticostriatal
AAVtracer: cortex (SSp)
Layer 5_PT
Sim1_KJ18
a_ctx_SSp_primary somatosensory cortex
corticostriatal
Sim1_KJ18_AAV:cortex(SSp)_537b
PT corticostriatal
AAVtracer: cortex (SSp)
1in5 brain series
Layer 5_PT
Sim1_KJ18
a_ctx_SSp_primary somatosensory cortex
corticostriatal
Sim1_KJ18_AAV:cortex(SSp)_9465
PT corticostriatal
AAVtracer: cortex (SSp)
Layer 5_PT
Sim1_KJ18
a_ctx_SSp_primary somatosensory cortex
corticostriatal
Sim1_KJ18_AAV:cortex(SSp)_9515
PT corticostriatal
AAVtracer: cortex (SSp)
Layer 5_PT
Sim1_KJ18
a_ctx_SSp_primary somatosensory cortex
corticostriatal
Syt17_NO14_AAV:cortex(PL)_2385
PT/IT corticostriatal
AAVtracer: cortex (PL)
1in5 brain series
Layer 5_PT and IT
Syt17_NO14
a_ctx_prefrontal cortex
corticostriatal
Syt17_NO14_AAV:cortex(PL)_4212
PT/IT corticostriatal
AAVtracer: cortex(PL)
Layer 5_PT and IT
Syt17_NO14
a_ctx_prefrontal cortex
corticostriatal
Syt17_NO14_AAV:cortex(PL)_4213
PT/IT corticostriatal
AAVtracer: cortex (PL)
Layer 5_PT and IT
Syt17_NO14
a_ctx_prefrontal cortex
corticostriatal
Syt17_NO14_AAV:cortex(PL)_4217
PT/IT corticostriatal
AAVtracer: cortex(PL)
Layer 5_PT and IT
Syt17_NO14
a_ctx_prefrontal cortex
corticostriatal
Syt17_NO14_AAV:cortex(PL)_0430
corticostriatal
AAVtracer: cortex (MOs,PL,AC)
Cerebral Cortex
Syt17_NO14
a_ctx_prefrontal cortex
corticostriatal
Syt17_NO14_AAV:cortex(SSp)_0435
corticostriatal
AAVtracer:cortex(SSp)
note: retrograde labeling in piriform cortex and thalamus
Cerebral Cortex
Syt17_NO14
a_ctx_SSp_primary somatosensory cortex
corticostriatal
patches
Syt17_NO14_AAV:hippocampus_9465
hippocampus
AAVtracer: ventral CA1
inputs to accumbens, prefrontal cortex
1in5 brain series
Syt17_NO14
a_ctx_hippocampus
accumbens
corticostriatal
Syt17_NO14_AAV:thalamus(IL)_9465
thalamostriatal
AAVtracer: thalamus (IL)
input to striatum and cortex
Syt17_NO14
a_thal_IL_intralaminar
thalamostriatal
thalamus
Syt17_NO14_AAV:VTA_9465
AAVtracer: VTA
labels DA projection to accumbens
and prefrontal cortex
Syt17_NO14
VTA
nigrostriatal
Tlx3_PL56_AAV:cortex(MOp)_1152
IT corticostriatal
AAVtracer: cortex (MOp)
Layer 5_IT
Layers (2/3/5a/5b/6)
Tlx3_PL56
a_ctx_MOp_primary motor cortex
corticostriatal
Tlx3_PL56_AAV:cortex(MOp)_4258
IT corticostriatal
AAVtracer: cortex (MOp)
1in5 brain series
Layer 5_IT
Tlx3_PL56
a_ctx_MOp_primary motor cortex
corticostriatal
Tlx3_PL56_AAV:cortex(SSp)_1157
IT corticostriatal
AAVtracer: cortex (SSp)
Layer 5_IT
Tlx3_PL56
a_ctx_SSp_primary somatosensory cortex
corticostriatal
Tlx3_PL56_AAV:cortex(SSp)_1216
IT corticostriatal
AAVtracer: cortex (SSp)
1in5 brain series
Layer 5_IT
Tlx3_PL56
a_ctx_SSp_primary somatosensory cortex
corticostriatal
Vipr2_KH234_AAV:thalamus(VPM)_4701
thalamo-cortical
AAVtracer: thalamus (VPM)
Vipr2_KH234
thalamo-cortical
thalamus
wt_MH4279_AAV:cortex(MOp/SSp)_4279
wild type: two AAV injections
AAVred: cortex (MOp)
AAVgreen: cortex (SSp)
Cerebral Cortex
a_ctx_MOp_primary motor cortex
a_ctx_SSp_primary somatosensory cortex
corticostriatal
wild type
zltr_501_AS01_Chat_GP_stack20.jpx
zltr_502_AS02_Chat_GP_stack20.jpx
zltr_503_AS_Chat_PV_RGB.jpx
zltr_504_AS04_KG139_cof.jpx
Sepw1_NP39_AAV:cortex(SSp)_0595
layer 2/3
AAVtracer: Cortex (SSp)
cortico-cortical and cortico-striatal
Cerebral Cortex
Layer 2/3
Sepw1_NP39
a_ctx_SSp_primary somatosensory cortex
Sepw1_NP39_AAV:cortex(SSp)_4447
Layer 2/3
AAVtracer: cortex (SSp)
Cerebral Cortex
Layer 2/3
Sepw1_NP39
Arhgef6_NL189_AAV:BL amygdala_1149
Amygdala (BL)
AAVtracer: BL amygdala
Arhgef6_NL189
amygdala
patches
Sepw1_NP39_AAV:cortex(MOp)_4816
lyare 2/3
AAVtracer: cortex (MOp)
Cerebral Cortex
Layer 2/3
Sepw1_NP39
a_ctx_MOp_primary motor cortex
corticostriatal
Sim1_KJ18_AAV:cortex (MOp)_ 3969
Layer 5: PT corticostriatal
AAVtracer: cortex (SSp)
Layer 5_PT
Sim1_KJ18
a_ctx_SSp_primary somatosensory cortex
corticostriatal
Sim1_KJ18_AAV:cortex (MOp)_ 3168
Layer 5: PT corticostriatal
AAVtracer: cortex (MOp)
Layer 5_PT
Sim1_KJ18
a_ctx_MOp_primary motor cortex
corticostriatal
Sepw1_NP39_AAV(SSp/MOp)_0089
Layer 2/3
AAVtracer (SSp some MOp)
Layer 2/3
Sepw1_NP39
a_ctx_MOp_primary motor cortex
a_ctx_SSp_primary somatosensory cortex
Sepw1_NP39_AAV(SSp)_0565
Layer 2/3
AAVtracer (SSp)
projects to MOp and secondary SS cortex
Layer 2/3
Sepw1_NP39
a_ctx_SSp_primary somatosensory cortex
Ebf2_NP183_AAV:cortex(SSp)_0480
Layer 6b
AAVtracer: SSp and MOp
axons distributed in L2-5
Parvalbumin (PV) immunostain: RED
Ebf2_NP183
Layer 6
Layer 6b
a_ctx_MOp_primary motor cortex
a_ctx_SSp_primary somatosensory cortex
Syt17_NO14_AAV:cortex(AId)_4631
AAV tracer: prefrontal cortex (AId)
inputs to striatal patches
IT corticostriatal type
Layer 5_IT
Syt17_NO14
a_ctx_prefrontal cortex
corticostriatal
patches
Syt17_NO14_AAV:cortex(AId)_4632
AAVtracer: cortex (AId)
input to striatal patches
IT corrticostriatal neurons
Cerebral Cortex
Layer 5_IT
Syt17_NO14
a_ctx_prefrontal cortex
corticostriatal
patches
Rgs14_SR63_AAV:CA2_847
AAVtracer:Hippocampus(CA2)
Rgs14_SR63
a_ctx_hippocampus
Rgs14_SR63_AAV(CA2)_846
AAVtracer:Hippocampus(CA2)
Rgs14_SR63
a_ctx_hippocampus
Sepw1_NP67_CreReporter_1376
Cre reporter
patch selective line
02_Cre_withReporter
Sepw1_NP67
patches
striatum
Tlx3_PL56_CreReporter_5577
Layer 5: IT
Cre reporter
02_Cre_withReporter
Layer 5_IT
Tlx3_PL56
GN220_AAV:SSp_3863
Layer 6_corticothalamic
AAV: SSp
Layer 6
Ntsr1_GN220
a_ctx_SSp_primary somatosensory cortex
corticothalamic
GN220_AAV:MOp_3861
Layer 6: corticothalamic
AAVtracer: MOp
Layer 6
Ntsr1_GN220
a_ctx_MOp_primary motor cortex
corticothalamic
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